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Showing all 43 items for (author: trono & d)

EMDB-17819:
XBB 1.0 RBD bound to P4J15 (Local)
Method: single particle / : Duhoo Y, Lau K

EMDB-17849:
XBB 1.0 RBD bound to P4J15 (Global)
Method: single particle / : Duhoo Y, Lau K

EMDB-17850:
SARS-CoV-2 XBB 1.0 closed conformation.
Method: single particle / : Duhoo Y, Lau K

PDB-8pq2:
XBB 1.0 RBD bound to P4J15 (Local)
Method: single particle / : Duhoo Y, Lau K

PDB-8psd:
SARS-CoV-2 XBB 1.0 closed conformation.
Method: single particle / : Duhoo Y, Lau K

EMDB-15592:
BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

PDB-8aqw:
BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-14922:
cryo-EM structure of omicron spike in complex with de novo designed binder, full map
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

PDB-7zrv:
cryo-EM structure of omicron spike in complex with de novo designed binder, full map
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

EMDB-14930:
cryo-EM structure of omicron spike in complex with de novo designed binder, local
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

EMDB-14947:
cryo-EM structure of D614 spike in complex with de novo designed binder, full and local maps(addition)
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

PDB-7zsd:
cryo-EM structure of omicron spike in complex with de novo designed binder, local
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

PDB-7zss:
cryo-EM structure of D614 spike in complex with de novo designed binder
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

EMDB-15588:
BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-15589:
Beta SARS-CoV-2 Spike bound to mouse ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-15590:
BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-15591:
BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

PDB-8aqs:
BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

PDB-8aqt:
Beta SARS-CoV-2 Spike bound to mouse ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

PDB-8aqu:
BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

PDB-8aqv:
BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (local)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-15541:
Beta SARS-CoV-2 Spike bound to mouse ACE2 (two up, full)
Method: single particle / : Ni D, Lau K, Turelli P, Beckert B, Nazarov S, Myasnikov A, Trono D, Stahlberg H, Pojer F, Uchikawa E

EMDB-15580:
BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (two up, full)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-15581:
BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (three up, full)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-15584:
BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (two up, full)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-15585:
BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (three up, full)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-15586:
BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (two up, full)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-15587:
BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (three up, full)
Method: single particle / : Lau K, Ni D, Beckert B, Nazarov S, Myasnikov A, Pojer F, Stahlberg H, Uchikawa E

EMDB-14141:
SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global)
Method: single particle / : Ni D, Lau K, Turelli P, Fenwick C, Perez L, Pojer F, Stahlberg H, Pantaleo G, Trono D

EMDB-14142:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD up - 1-P2G3 and 1-P5C3 Fabs (Local)
Method: single particle / : Ni D, Lau K, Turelli P, Fenwick C, Perez L, Pojer F, Stahlberg H, Pantaleo G, Trono D

EMDB-14143:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD down - 1-P2G3 Fab (Local)
Method: single particle / : Ni D, Lau K, Turelli P, Fenwick C, Perez L, Pojer F, Stahlberg H, Pantaleo G, Trono D

PDB-7qti:
SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global)
Method: single particle / : Ni D, Lau K, Turelli P, Fenwick C, Perez L, Pojer F, Stahlberg H, Pantaleo G, Trono D

PDB-7qtj:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD up - 1-P2G3 and 1-P5C3 Fabs (Local)
Method: single particle / : Ni D, Lau K, Turelli P, Fenwick C, Perez L, Pojer F, Stahlberg H, Pantaleo G, Trono D

PDB-7qtk:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD down - 1-P2G3 Fab (Local)
Method: single particle / : Ni D, Lau K, Turelli P, Fenwick C, Perez L, Pojer F, Stahlberg H, Pantaleo G, Trono D

EMDB-14087:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD and NTD (Local)
Method: single particle / : Ni D, Lau K, Turelli P, Beckert B, Nazarov S, Pojer F, Myasnikov A, Stahlberg H, Trono D

PDB-7qo9:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD and NTD (Local)
Method: single particle / : Ni D, Lau K, Turelli P, Beckert B, Nazarov S, Pojer F, Myasnikov A, Stahlberg H, Trono D

EMDB-14086:
SARS-CoV-2 S Omicron Spike B.1.1.529
Method: single particle / : Ni D, Lau K, Turelli P, Beckert B, Nazarov S, Pojer F, Myasnikov A, Stahlberg H, Trono D

PDB-7qo7:
SARS-CoV-2 S Omicron Spike B.1.1.529
Method: single particle / : Ni D, Lau K, Turelli P, Beckert B, Nazarov S, Pojer F, Myasnikov A, Stahlberg H, Trono D

EMDB-13190:
P5C3 is a potent fab neutralizer
Method: single particle / : perez L

EMDB-13265:
the local resolution of Fab p5c3.
Method: single particle / : perez L

EMDB-13415:
MaP OF P5C3RBD Interface
Method: single particle / : Perez L

PDB-7p40:
P5C3 is a potent fab neutralizer
Method: single particle / : perez L

PDB-7phg:
MaP OF P5C3RBD Interface
Method: single particle / : Perez L

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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Related info.:EMN Search / EMN Statistics

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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